TSS: Hg 100757.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-7608 |entrez_id=92014 |gc_percent=0.447761 |gene_alias=CG7943|MCART1 |gene_description=solute carrier family 25 member 51 |gen...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MCART1= | |||
|all_trans=BC025343:-173 BC042126:-173 BC021061:-173 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-173 | |||
|distance_to_tss=-7608 | |distance_to_tss=-7608 | ||
|end=37911968 | |||
|entrez_id=92014 | |entrez_id=92014 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_033412 | |nearest_refseq=NM_033412 | ||
|nearest_unigene=Hs.634120 | |nearest_unigene=Hs.634120 | ||
|num_trans=3 | |||
|species=human | |||
|start=37911954 | |||
|strand=- | |||
|tata_box="53(ACCTTTAAAGAC,+,0.00)" | |tata_box="53(ACCTTTAAAGAC,+,0.00)" | ||
|transcript_name=BC025343 BC042126 BC021061 | |||
|tss_classification=no | |||
|tss_id=hg_100757.1 | |tss_id=hg_100757.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:14, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -7608 |
|---|---|
| Nearest PromoterID: | NR_024873 |
| Entrez ID: | 92014 |
| Nearest Unigene: | Hs.634120 |
| Nearest Refseq: | NM_033412 |
| Nearest Ensembl: | ENSG00000122696 |
| Gene Name: | SLC25A51 |
| Gene Alias: | CG7943 |
| Gene Description: | solute carrier family 25 member 51 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "53(ACCTTTAAAGAC,+,0.00)" |