TSS: Hg 100803.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-6 |entrez_id=101927069 |gc_percent=0.432836 |gene_alias=- |gene_description=uncharacterized LOC101927069 |gene_name=LOC10192706...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NR_110647:0 AK057188:0 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |||
|distance_to_tss=-6 | |distance_to_tss=-6 | ||
|end=68975859 | |||
|entrez_id=101927069 | |entrez_id=101927069 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101927069 | |gene_description=uncharacterized LOC101927069 | ||
|gene_name=LOC101927069 | |gene_id=101927069 | ||
|gene_name=uncharacterized LOC101927069 | |||
|gene_source=EntrezGene:101927069 | |||
|gene_symbol=LOC101927069 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_110647 | |nearest_promoter_id=NR_110647 | ||
|nearest_refseq=NR_110647 | |nearest_refseq=NR_110647 | ||
|nearest_unigene=Hs.663405 | |nearest_unigene=Hs.663405 | ||
|num_trans=2 | |||
|species=human | |||
|start=68975834 | |||
|strand=- | |||
|tata_box="-29(TCTTATAAAAAG,-,0.00)" | |tata_box="-29(TCTTATAAAAAG,-,0.00)" | ||
|transcript_name=NR_110647 AK057188 | |||
|tss_classification=no | |||
|tss_id=hg_100803.1 | |tss_id=hg_100803.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:16, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -6 |
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| Nearest PromoterID: | NR_110647 |
| Entrez ID: | 101927069 |
| Nearest Unigene: | Hs.663405 |
| Nearest Refseq: | NR_110647 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC101927069 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927069 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-29(TCTTATAAAAAG,-,0.00)" |
TSS expression
Expression data not found.