TSS: Hg 100805.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=1145 |entrez_id=9414 |gc_percent=0.487562 |gene_alias=C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 |gene_description=tight junc...") |
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{{TSSDetail | {{TSSDetail | ||
|DFNA51= | |||
|DUP9q21.11= | |||
|PFIC4= | |||
|X104= | |||
|ZO2= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=1145 | |distance_to_tss=1145 | ||
|end=69175205 | |||
|entrez_id=9414 | |entrez_id=9414 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_004817 | |nearest_refseq=NM_004817 | ||
|nearest_unigene=Hs.50382 | |nearest_unigene=Hs.50382 | ||
|num_trans=0 | |||
|species=human | |||
|start=69175194 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100805.1 | |tss_id=hg_100805.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:16, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1145 |
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| Nearest PromoterID: | NM_004817 |
| Entrez ID: | 9414 |
| Nearest Unigene: | Hs.50382 |
| Nearest Refseq: | NM_004817 |
| Nearest Ensembl: | ENSG00000119139 |
| Gene Name: | TJP2 |
| Gene Alias: | C9DUPq21.11 |
| Gene Description: | tight junction protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |