TSS: Hg 100809.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=166126 |entrez_id=9413 |gc_percent=0.532338 |gene_alias=C9orf61|X123 |gene_description=family with sequence similarity 189 membe...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|X123= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=166126 | |distance_to_tss=166126 | ||
|end=69495455 | |||
|entrez_id=9413 | |entrez_id=9413 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_004816 | |nearest_refseq=NM_004816 | ||
|nearest_unigene=Hs.118003 | |nearest_unigene=Hs.118003 | ||
|num_trans=0 | |||
|species=human | |||
|start=69495446 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100809.1 | |tss_id=hg_100809.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:16, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 166126 |
|---|---|
| Nearest PromoterID: | NM_004816 |
| Entrez ID: | 9413 |
| Nearest Unigene: | Hs.118003 |
| Nearest Refseq: | NM_004816 |
| Nearest Ensembl: | ENSG00000135063 |
| Gene Name: | FAM189A2 |
| Gene Alias: | C9orf61 |
| Gene Description: | family with sequence similarity 189 member A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |