TSS: Hg 100931.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=981 |entrez_id=23670 |gc_percent=0.562189 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000377066.9:-474 ENST00000542935.5:-474 uc010mos.3:-474 uc064trr.1:-474 BC140773:-474 BC144510:-474 BC171782:-474 | |||
|chr=chr9 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=-474 | |||
|distance_to_tss=981 | |distance_to_tss=981 | ||
|end=71767912 | |||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 2 | |gene_description=transmembrane protein 2 | ||
|gene_name=TMEM2 | |gene_id=23670 | ||
|gene_name=transmembrane protein 2 | |||
|gene_source=HGNC:11869 | |||
|gene_symbol=TMEM2 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:11869 | |||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
|nearest_promoter_id=NM_001135820 | |nearest_promoter_id=NM_001135820 | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
|num_trans=7 | |||
|species=human | |||
|start=71767894 | |||
|strand=- | |||
|transcript_name=ENST00000377066.9 ENST00000542935.5 uc010mos.3 uc064trr.1 BC140773 BC144510 BC171782 | |||
|tss_classification=yes | |||
|tss_id=hg_100931.1 | |tss_id=hg_100931.1 | ||
|tss_score=1 | |||
|uniprot_id=F5H6B2 Q9UHN6 | |||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 981 |
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| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | transmembrane protein 2 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.