TSS: Hg 100934.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000377044.8:0 NM_013390:0 NM_001135820:0 uc011lsa.1:0 AK056807:337 ENST00000543165.1:371 uc064trx.1:371 AK300405:371 AF137030:392 AB037833:407 BC146780:407 ENST00000377066.9:498 ENST00000542935.5:498 uc010mos.3:498 uc064trr.1:498 BC140773:498 BC144510:498 BC171782:498 | |||
|chr=chr9 | |||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |||
|distance_to_tss=-9 | |distance_to_tss=-9 | ||
|end=71768902 | |||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 2 | |gene_description=transmembrane protein 2 | ||
|gene_name=TMEM2 | |gene_id=23670 | ||
|gene_name=transmembrane protein 2 | |||
|gene_source=HGNC:11869 | |||
|gene_symbol=TMEM2 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:11869 | |||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
|nearest_promoter_id=NM_013390 | |nearest_promoter_id=NM_013390 | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
|num_trans=18 | |||
|species=human | |||
|start=71768883 | |||
|strand=- | |||
|transcript_name=ENST00000377044.8 NM_013390 NM_001135820 uc011lsa.1 | |||
|tss_classification=yes | |||
|tss_id=hg_100934.1 | |tss_id=hg_100934.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A024R229 Q9UHN6 | |||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -9 |
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| Nearest PromoterID: | NM_013390 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | transmembrane protein 2 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.