TSS: Hg 100945.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=-329 | |distance_to_tss=-329 | ||
|end=72305117 | |||
|entrez_id=100507540 | |entrez_id=100507540 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
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|nearest_refseq=NR_110952 | |nearest_refseq=NR_110952 | ||
|nearest_unigene=Hs.54957 | |nearest_unigene=Hs.54957 | ||
|num_trans=0 | |||
|species=human | |||
|start=72305097 | |||
|strand=- | |||
|tata_box="-54(CCTTATCTACCC,+,0.00)" | |tata_box="-54(CCTTATCTACCC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100945.1 | |tss_id=hg_100945.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:22, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -329 |
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Nearest PromoterID: | NR_110952 |
Entrez ID: | 100507540 |
Nearest Unigene: | Hs.54957 |
Nearest Refseq: | NR_110952 |
Nearest Ensembl: | ENSG00000225434 |
Gene Name: | LINC01504 |
Gene Alias: | - |
Gene Description: | long intergenic non-protein coding RNA 1504 |
Gene Type: | ncRNA |
CpG%: | 0.02 |
GC%: | 0.477612 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-54(CCTTATCTACCC,+,0.00)" |