TSS: Hg 100972.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000453787.1:19 NR_121181:19 NR_121180:19 NR_121120:19 uc064tsy.1:19 ENST00000449235.5:30 uc064tsx.1:30 ENST00000423171.5:60 uc064tsw.1:60 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=19 | |||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
|end=72874136 | |||
|entrez_id=101927258 | |entrez_id=101927258 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1474 | |gene_description=long intergenic non-protein coding RNA 1474 | ||
|gene_name=LINC01474 | |gene_id=101927258 | ||
|gene_name=long intergenic non-protein coding RNA 1474 | |||
|gene_source=HGNC:51111 | |||
|gene_symbol=LINC01474 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:51111 | |||
|nearest_ensembl=ENSG00000236849 | |nearest_ensembl=ENSG00000236849 | ||
|nearest_promoter_id=NR_121120 | |nearest_promoter_id=NR_121120 | ||
|nearest_refseq=NR_121120 | |nearest_refseq=NR_121120 | ||
|nearest_unigene=Hs.586433 | |nearest_unigene=Hs.586433 | ||
|num_trans=9 | |||
|species=human | |||
|start=72874127 | |||
|strand=- | |||
|transcript_name=ENST00000453787.1 NR_121181 NR_121180 NR_121120 uc064tsy.1 | |||
|tss_classification=no | |||
|tss_id=hg_100972.1 | |tss_id=hg_100972.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -23 |
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| Nearest PromoterID: | NR_121120 |
| Entrez ID: | 101927258 |
| Nearest Unigene: | Hs.586433 |
| Nearest Refseq: | NR_121120 |
| Nearest Ensembl: | ENSG00000236849 |
| Gene Name: | long intergenic non-protein coding RNA 1474 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1474 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.