TSS: Hg 10098.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-49534 |entrez_id=54206 |gc_percent=0.502488 |gene_alias=GENE-33|MIG-6|MIG6|RALT |gene_description=ERBB receptor feedback inhibi...") |
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{{TSSDetail | {{TSSDetail | ||
|MIG-6= | |||
|MIG6= | |||
|RALT= | |||
|chr=chr1 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=-49534 | |distance_to_tss=-49534 | ||
|end=8075869 | |||
|entrez_id=54206 | |entrez_id=54206 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_018948 | |nearest_refseq=NM_018948 | ||
|nearest_unigene=Hs.605445 | |nearest_unigene=Hs.605445 | ||
|num_trans=0 | |||
|species=human | |||
|start=8075865 | |||
|strand=- | |||
|tata_box="-35(GGGTATAAAAAC,-,0.00)" | |tata_box="-35(GGGTATAAAAAC,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10098.1 | |tss_id=hg_10098.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -49534 |
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| Nearest PromoterID: | NM_018948 |
| Entrez ID: | 54206 |
| Nearest Unigene: | Hs.605445 |
| Nearest Refseq: | NM_018948 |
| Nearest Ensembl: | ENSG00000116285 |
| Gene Name: | ERRFI1 |
| Gene Alias: | GENE-33 |
| Gene Description: | ERBB receptor feedback inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GGGTATAAAAAC,-,0.00)" |