TSS: Hg 100983.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=22385 |entrez_id=216 |gc_percent=0.492537 |gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
|ALDH-E1= | |||
|ALDH1= | |||
|ALDH11= | |||
|HEL-9= | |||
|HEL-S-53e= | |||
|HEL12= | |||
|PUMB1= | |||
|RALDH1= | |||
|chr=chr9 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |||
|distance_to_tss=22385 | |distance_to_tss=22385 | ||
|end=72930938 | |||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
Line 12: | Line 23: | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
|num_trans=0 | |||
|species=human | |||
|start=72930926 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100983.1 | |tss_id=hg_100983.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 22385 |
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Nearest PromoterID: | NM_000689 |
Entrez ID: | 216 |
Nearest Unigene: | Hs.76392 |
Nearest Refseq: | NM_000689 |
Nearest Ensembl: | ENSG00000165092 |
Gene Name: | ALDH1A1 |
Gene Alias: | ALDC |
Gene Description: | aldehyde dehydrogenase 1 family member A1 |
Gene Type: | protein-coding |
CpG%: | 0.04 |
GC%: | 0.492537 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |