TSS: Hg 101037.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=223 |entrez_id=55312 |gc_percent=0.746269 |gene_alias=RIFK |gene_description=riboflavin kinase |gene_name=RFK |gene_type=protein...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC015473:-40 KJ899117:107 KJ905495:107 BC007069:-112 ENST00000490113.1:168 uc064tug.1:168 ENST00000376736.5:-195 uc004akd.3:-195 AK002011:-195 ENST00000472900.5:-207 ENST00000479197.1:-207 uc064tuj.1:-207 uc064tuk.1:-207 AK315734:-207 AK307079:-207 NM_018339:-218 ENST00000483155.5:343 uc064tuh.1:343 | |||
|chr=chr9 | |||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=-40 | |||
|distance_to_tss=223 | |distance_to_tss=223 | ||
|end=76394310 | |||
|entrez_id=55312 | |entrez_id=55312 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_018339 | |nearest_refseq=NM_018339 | ||
|nearest_unigene=Hs.37558 | |nearest_unigene=Hs.37558 | ||
|num_trans=18 | |||
|species=human | |||
|start=76394299 | |||
|strand=- | |||
|transcript_name=BC015473 | |||
|tss_classification=yes | |||
|tss_id=hg_101037.1 | |tss_id=hg_101037.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:26, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 223 |
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| Nearest PromoterID: | NM_018339 |
| Entrez ID: | 55312 |
| Nearest Unigene: | Hs.37558 |
| Nearest Refseq: | NM_018339 |
| Nearest Ensembl: | ENSG00000135002 |
| Gene Name: | RFK |
| Gene Alias: | RIFK |
| Gene Description: | riboflavin kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |