TSS: Hg 10108.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=43676 |entrez_id=50651 |gc_percent=0.567164 |gene_alias=DNB5 |gene_description=solute carrier family 45 member 1 |gene_name=SLC4...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=43676 | |distance_to_tss=43676 | ||
|end=8361763 | |||
|entrez_id=50651 | |entrez_id=50651 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_001080397 | |nearest_refseq=NM_001080397 | ||
|nearest_unigene=Hs.463036 | |nearest_unigene=Hs.463036 | ||
|num_trans=0 | |||
|species=human | |||
|start=8361759 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10108.1 | |tss_id=hg_10108.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:28, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 43676 |
|---|---|
| Nearest PromoterID: | NM_001080397 |
| Entrez ID: | 50651 |
| Nearest Unigene: | Hs.463036 |
| Nearest Refseq: | NM_001080397 |
| Nearest Ensembl: | ENSG00000162426 |
| Gene Name: | SLC45A1 |
| Gene Alias: | DNB5 |
| Gene Description: | solute carrier family 45 member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |