TSS: Hg 101084.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-884 |entrez_id=9630 |gc_percent=0.427861 |gene_alias=- |gene_description=G protein subunit alpha 14 |gene_name=GNA14 |gene_type...") |
No edit summary |
||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=-884 | |distance_to_tss=-884 | ||
|end=77649210 | |||
|entrez_id=9630 | |entrez_id=9630 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
Line 12: | Line 15: | ||
|nearest_refseq=NM_004297 | |nearest_refseq=NM_004297 | ||
|nearest_unigene=Hs.657795 | |nearest_unigene=Hs.657795 | ||
|num_trans=0 | |||
|species=human | |||
|start=77649189 | |||
|strand=- | |||
|tata_box="32(TGCTTTTAAAGT,-,0.00),33(GCTTTTAAAGTT,+,0.00)" | |tata_box="32(TGCTTTTAAAGT,-,0.00),33(GCTTTTAAAGTT,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101084.1 | |tss_id=hg_101084.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:28, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -884 |
---|---|
Nearest PromoterID: | NM_004297 |
Entrez ID: | 9630 |
Nearest Unigene: | Hs.657795 |
Nearest Refseq: | NM_004297 |
Nearest Ensembl: | ENSG00000156049 |
Gene Name: | GNA14 |
Gene Alias: | - |
Gene Description: | G protein subunit alpha 14 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.427861 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "32(TGCTTTTAAAGT,-,0.00),33(GCTTTTAAAGTT,+,0.00)" |