TSS: Hg 101113.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=63348 |entrez_id=101927477 |gc_percent=0.472637 |gene_alias=XLOC_000303 |gene_description=long intergenic non-protein coding RNA 15...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=DQ598624:251 DQ582191:-253 DQ590344:-284 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=251 | |||
|distance_to_tss=63348 | |distance_to_tss=63348 | ||
|end=79887884 | |||
|entrez_id=101927477 | |entrez_id=101927477 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_121212 | |nearest_refseq=NR_121212 | ||
|nearest_unigene=Hs.571630 | |nearest_unigene=Hs.571630 | ||
|num_trans=3 | |||
|species=human | |||
|start=79887872 | |||
|strand=- | |||
|transcript_name=DQ598624 | |||
|tss_classification=no | |||
|tss_id=hg_101113.1 | |tss_id=hg_101113.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:29, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 63348 |
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| Nearest PromoterID: | NR_121213 |
| Entrez ID: | 101927477 |
| Nearest Unigene: | Hs.571630 |
| Nearest Refseq: | NR_121212 |
| Nearest Ensembl: | |
| Gene Name: | LINC01507 |
| Gene Alias: | XLOC_000303 |
| Gene Description: | long intergenic non-protein coding RNA 1507 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |