TSS: Hg 101118.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=33587 |entrez_id=7088 |gc_percent=0.348259 |gene_alias=ESG|ESG1|GRG1 |gene_description=transducin like enhancer of split 1 |gene_na...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ESG1= | |||
|GRG1= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=33587 | |distance_to_tss=33587 | ||
|end=81655950 | |||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
|num_trans=0 | |||
|species=human | |||
|start=81655946 | |||
|strand=- | |||
|tata_box="-35(TCTTATAAAACC,+,0.00)" | |tata_box="-35(TCTTATAAAACC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101118.1 | |tss_id=hg_101118.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:29, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 33587 |
|---|---|
| Nearest PromoterID: | NM_001303104 |
| Entrez ID: | 7088 |
| Nearest Unigene: | Hs.197320 |
| Nearest Refseq: | NM_005077 |
| Nearest Ensembl: | ENSG00000196781 |
| Gene Name: | TLE1 |
| Gene Alias: | ESG |
| Gene Description: | transducin like enhancer of split 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(TCTTATAAAACC,+,0.00)" |