TSS: Hg 101220.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=46 |entrez_id=79670 |gc_percent=0.661692 |gene_alias=PAPD6|TUT7 |gene_description=zinc finger CCHC-type containing 6 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|TUT7= | |||
|all_trans=ENST00000277141.10:0 ENST00000375963.7:0 uc064ubw.1:0 uc004aoq.4:0 AL832193:0 CR933644:0 CR936608:0 AK055546:0 BC032456:0 ENST00000375960.6:-34 uc004aot.4:-34 AL832026:-34 CR933643:-43 BX641077:-43 AK308352:47 BC111003:-54 NM_024617:-67 NM_001185074:-67 NM_001185059:-67 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |||
|distance_to_tss=46 | |distance_to_tss=46 | ||
|end=86354420 | |||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=PAPD6|TUT7 | |gene_alias=PAPD6|TUT7 | ||
|gene_description=zinc finger CCHC-type containing 6 | |gene_description=zinc finger CCHC-type containing 6 | ||
|gene_name=ZCCHC6 | |gene_id=79670 | ||
|gene_name=zinc finger CCHC-type containing 6 | |||
|gene_source=HGNC:25817 | |||
|gene_symbol=ZCCHC6 | |||
|gene_synonyms=FLJ13409 KIAA1711 PAPD6 TUT7 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25817 | |||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
|nearest_promoter_id=NM_001330718 | |nearest_promoter_id=NM_001330718 | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
|num_trans=19 | |||
|species=human | |||
|start=86354388 | |||
|strand=- | |||
|transcript_name=ENST00000277141.10 ENST00000375963.7 uc064ubw.1 uc004aoq.4 AL832193 CR933644 CR936608 AK055546 BC032456 | |||
|tss_classification=yes | |||
|tss_id=hg_101220.1 | |tss_id=hg_101220.1 | ||
|tss_score=1 | |||
|uniprot_id=Q5VYS8 X6R3Q3 | |||
}} | }} | ||
Revision as of 18:34, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 46 |
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| Nearest PromoterID: | NM_001330718 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | zinc finger CCHC-type containing 6 |
| Gene Alias: | PAPD6 |
| Gene Description: | zinc finger CCHC-type containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.