TSS: Hg 101254.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=23530 |entrez_id=392360 |gc_percent=0.422886 |gene_alias=CTSL3|HCTSL-s |gene_description="cathepsin L family member 3, pseudogen...") |
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{{TSSDetail | {{TSSDetail | ||
|HCTSL-s= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |||
|distance_to_tss=23530 | |distance_to_tss=23530 | ||
|end=87796467 | |||
|entrez_id=392360 | |entrez_id=392360 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_001023564 | |nearest_refseq=NM_001023564 | ||
|nearest_unigene=Hs.690450 | |nearest_unigene=Hs.690450 | ||
|num_trans=0 | |||
|species=human | |||
|start=87796423 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101254.1 | |tss_id=hg_101254.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:35, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 23530 |
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Nearest PromoterID: | NR_027917 |
Entrez ID: | 392360 |
Nearest Unigene: | Hs.690450 |
Nearest Refseq: | NM_001023564 |
Nearest Ensembl: | ENSG00000188029 |
Gene Name: | CTSL3P |
Gene Alias: | CTSL3 |
Gene Description: | "cathepsin L family member 3, pseudogene" |
Gene Type: | pseudo |
CpG%: | 0.01 |
GC%: | 0.422886 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |