TSS: Hg 101260.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=12342 |entrez_id=102724156 |gc_percent=0.542289 |gene_alias=- |gene_description=uncharacterized LOC102724156 |gene_name=LOC1027...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK124340:0 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |||
|distance_to_tss=12342 | |distance_to_tss=12342 | ||
|end=88065565 | |||
|entrez_id=102724156 | |entrez_id=102724156 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC102724156 | |gene_description=uncharacterized LOC102724156 | ||
|gene_name= | |gene_id=100131068 | ||
|gene_name=endogenous retrovirus group I member 1 | |||
|gene_source=HGNC:39052 | |||
|gene_symbol=ERVI-1 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:39052 | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_135137 | |nearest_promoter_id=NR_135137 | ||
|nearest_refseq=NR_135137 | |nearest_refseq=NR_135137 | ||
|nearest_unigene=Hs.633031 | |nearest_unigene=Hs.633031 | ||
|num_trans=1 | |||
|species=human | |||
|start=88065550 | |||
|strand=- | |||
|transcript_name=AK124340 | |||
|tss_classification=no | |||
|tss_id=hg_101260.1 | |tss_id=hg_101260.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:35, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 12342 |
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| Nearest PromoterID: | NR_135137 |
| Entrez ID: | 102724156 |
| Nearest Unigene: | Hs.633031 |
| Nearest Refseq: | NR_135137 |
| Nearest Ensembl: | |
| Gene Name: | endogenous retrovirus group I member 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC102724156 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.