TSS: Hg 101285.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-1298 |entrez_id=53358 |gc_percent=0.641791 |gene_alias=N-Shc|NSHC|RAI|SHCC |gene_description=SHC adaptor protein 3 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
|NSHC= | |||
|RAI= | |||
|SHCC= | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance= | |||
|distance_to_tss=-1298 | |distance_to_tss=-1298 | ||
|end=89180097 | |||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_016848 | |nearest_refseq=NM_016848 | ||
|nearest_unigene=Hs.292737 | |nearest_unigene=Hs.292737 | ||
|num_trans=0 | |||
|species=human | |||
|start=89180033 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101285.1 | |tss_id=hg_101285.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:36, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1298 |
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| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC3 |
| Gene Alias: | N-Shc |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |