TSS: Hg 101312.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=79691 |entrez_id=10507 |gc_percent=0.422886 |gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 |gene_description=semaphorin 4D |g...") |
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{{TSSDetail | {{TSSDetail | ||
|CD100= | |||
|M-sema-G= | |||
|SEMAJ= | |||
|chr=chr9 | |||
|coll-4= | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |||
|distance_to_tss=79691 | |distance_to_tss=79691 | ||
|end=89400007 | |||
|entrez_id=10507 | |entrez_id=10507 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_006378 | |nearest_refseq=NM_006378 | ||
|nearest_unigene=Hs.494406 | |nearest_unigene=Hs.494406 | ||
|num_trans=0 | |||
|species=human | |||
|start=89400003 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101312.1 | |tss_id=hg_101312.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:38, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 79691 |
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| Nearest PromoterID: | NM_006378 |
| Entrez ID: | 10507 |
| Nearest Unigene: | Hs.494406 |
| Nearest Refseq: | NM_006378 |
| Nearest Ensembl: | ENSG00000187764 |
| Gene Name: | SEMA4D |
| Gene Alias: | C9orf164 |
| Gene Description: | semaphorin 4D |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |