TSS: Hg 101393.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=65688 |entrez_id=4920 |gc_percent=0.432836 |gene_alias=BDB|BDB1|NTRKR2 |gene_description=receptor tyrosine kinase like orphan r...") |
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{{TSSDetail | {{TSSDetail | ||
|BDB1= | |||
|NTRKR2= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=65688 | |distance_to_tss=65688 | ||
|end=91884476 | |||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
|num_trans=0 | |||
|species=human | |||
|start=91884472 | |||
|strand=- | |||
|tata_box="-7(TTTTTTAAAGGT,+,0.00)" | |tata_box="-7(TTTTTTAAAGGT,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101393.1 | |tss_id=hg_101393.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:41, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 65688 |
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| Nearest PromoterID: | NM_004560 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | ROR2 |
| Gene Alias: | BDB |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(TTTTTTAAAGGT,+,0.00)" |