TSS: Hg 101415.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=22 |entrez_id=3376 |gc_percent=0.651741 |gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 |gene_description=isoleucyl-tRNA synthe...") |
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{{TSSDetail | {{TSSDetail | ||
|IARS1= | |||
|ILERS= | |||
|ILRS= | |||
|IRS= | |||
|PRO0785= | |||
|all_trans=ENST00000395554.7:13 ENST00000490438.1:13 uc064uhg.1:13 uc064uhi.1:13 ENST00000627121.2:-17 NM_013417:-17 NM_002161:-17 NR_073446:-17 uc064ugy.1:-17 AK301272:23 ENST00000375643.7:29 uc004art.4:29 ENST00000447699.6:34 uc010mqr.5:34 BX647071:34 BX648567:34 BX537429:34 BX538109:34 ENST00000443024.6:35 uc064ugz.1:35 BX537417:35 BX647430:39 AK308202:39 BX647236:41 U04953:44 AK293014:46 D28473:55 AB209234:64 ENST00000430417.1:88 uc064uhj.1:88 | |||
|chr=chr9 | |||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=13 | |||
|distance_to_tss=22 | |distance_to_tss=22 | ||
|end=92293739 | |||
|entrez_id=3376 | |entrez_id=3376 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 | |gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 | ||
|gene_description=isoleucyl-tRNA synthetase | |gene_description=isoleucyl-tRNA synthetase | ||
|gene_name=IARS | |gene_id=3376 | ||
|gene_name=isoleucyl-tRNA synthetase | |||
|gene_source=HGNC:5330 | |||
|gene_symbol=IARS | |||
|gene_synonyms=IARS1 ILRS | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5330 | |||
|nearest_ensembl=ENSG00000196305 | |nearest_ensembl=ENSG00000196305 | ||
|nearest_promoter_id=NM_013417 | |nearest_promoter_id=NM_013417 | ||
|nearest_refseq=NM_002161 | |nearest_refseq=NM_002161 | ||
|nearest_unigene=Hs.445403 | |nearest_unigene=Hs.445403 | ||
|num_trans=30 | |||
|species=human | |||
|start=92293728 | |||
|strand=- | |||
|transcript_name=ENST00000395554.7 ENST00000490438.1 uc064uhg.1 uc064uhi.1 | |||
|tss_classification=yes | |||
|tss_id=hg_101415.1 | |tss_id=hg_101415.1 | ||
|tss_score=1 | |||
|uniprot_id=Q5TCD1 | |||
}} | }} | ||
Revision as of 18:42, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 22 |
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| Nearest PromoterID: | NM_013417 |
| Entrez ID: | 3376 |
| Nearest Unigene: | Hs.445403 |
| Nearest Refseq: | NM_002161 |
| Nearest Ensembl: | ENSG00000196305 |
| Gene Name: | isoleucyl-tRNA synthetase |
| Gene Alias: | GRIDHH |
| Gene Description: | isoleucyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.