TSS: Hg 101454.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=-31 |entrez_id=23299 |gc_percent=0.830846 |gene_alias=SMALED2|bA526D8.1 |gene_description=BICD cargo adaptor 2 |gene_name=BICD2...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000356884.10:0 ENST00000375512.3:0 NM_015250:0 NM_001003800:0 uc004asp.2:0 uc004aso.2:0 BC073970:0 AY052562:0 KJ893354:53 AB014599:77 | |||
|bA526D8.1= | |||
|chr=chr9 | |||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |||
|distance_to_tss=-31 | |distance_to_tss=-31 | ||
|end=92764866 | |||
|entrez_id=23299 | |entrez_id=23299 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
|gene_alias=SMALED2|bA526D8.1 | |gene_alias=SMALED2|bA526D8.1 | ||
|gene_description=BICD cargo adaptor 2 | |gene_description=BICD cargo adaptor 2 | ||
|gene_name=BICD2 | |gene_id=23299 | ||
|gene_name=BICD cargo adaptor 2 | |||
|gene_source=HGNC:17208 | |||
|gene_symbol=BICD2 | |||
|gene_synonyms=KIAA0699 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:17208 | |||
|nearest_ensembl=ENSG00000185963 | |nearest_ensembl=ENSG00000185963 | ||
|nearest_promoter_id=NM_001003800 | |nearest_promoter_id=NM_001003800 | ||
|nearest_refseq=NM_015250 | |nearest_refseq=NM_015250 | ||
|nearest_unigene=Hs.436939 | |nearest_unigene=Hs.436939 | ||
|num_trans=10 | |||
|species=human | |||
|start=92764797 | |||
|strand=- | |||
|transcript_name=ENST00000356884.10 ENST00000375512.3 NM_015250 NM_001003800 uc004asp.2 uc004aso.2 BC073970 AY052562 | |||
|tss_classification=yes | |||
|tss_id=hg_101454.1 | |tss_id=hg_101454.1 | ||
|tss_score=1 | |||
|uniprot_id=Q8TD16 Q96FU2 | |||
}} | }} | ||
Revision as of 18:44, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -31 |
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| Nearest PromoterID: | NM_001003800 |
| Entrez ID: | 23299 |
| Nearest Unigene: | Hs.436939 |
| Nearest Refseq: | NM_015250 |
| Nearest Ensembl: | ENSG00000185963 |
| Gene Name: | BICD cargo adaptor 2 |
| Gene Alias: | SMALED2 |
| Gene Description: | BICD cargo adaptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.