TSS: Hg 101463.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-613 |entrez_id=84270 |gc_percent=0.776119 |gene_alias=BinCARD|C9orf89 |gene_description=caspase recruitment domain family memb...") |
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{{TSSDetail | {{TSSDetail | ||
|C9orf89= | |||
|all_trans=ENST00000428958.1:-14 uc064ujd.1:-14 | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-14 | |||
|distance_to_tss=-613 | |distance_to_tss=-613 | ||
|end=93095515 | |||
|entrez_id=84270 | |entrez_id=84270 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_032310 | |nearest_refseq=NM_032310 | ||
|nearest_unigene=Hs.434213 | |nearest_unigene=Hs.434213 | ||
|num_trans=2 | |||
|species=human | |||
|start=93095504 | |||
|strand=- | |||
|transcript_name=ENST00000428958.1 uc064ujd.1 | |||
|tss_classification=yes | |||
|tss_id=hg_101463.1 | |tss_id=hg_101463.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:44, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -613 |
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| Nearest PromoterID: | NR_134464 |
| Entrez ID: | 84270 |
| Nearest Unigene: | Hs.434213 |
| Nearest Refseq: | NM_032310 |
| Nearest Ensembl: | ENSG00000165233 |
| Gene Name: | CARD19 |
| Gene Alias: | BinCARD |
| Gene Description: | caspase recruitment domain family member 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |