TSS: Hg 101531.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=431 |entrez_id=84909 |gc_percent=0.587065 |gene_alias=AOPEP|AP-O|APO|C90RF3|ONPEP |gene_description=chromosome 9 open reading fr...") |
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{{TSSDetail | {{TSSDetail | ||
|AP-O= | |||
|APO= | |||
|C90RF3= | |||
|ONPEP= | |||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance= | |||
|distance_to_tss=431 | |distance_to_tss=431 | ||
|end=94727104 | |||
|entrez_id=84909 | |entrez_id=84909 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_032823 | |nearest_refseq=NM_032823 | ||
|nearest_unigene=Hs.434253 | |nearest_unigene=Hs.434253 | ||
|num_trans=0 | |||
|species=human | |||
|start=94727096 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101531.1 | |tss_id=hg_101531.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:47, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 431 |
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| Nearest PromoterID: | NM_032823 |
| Entrez ID: | 84909 |
| Nearest Unigene: | Hs.434253 |
| Nearest Refseq: | NM_032823 |
| Nearest Ensembl: | ENSG00000148120 |
| Gene Name: | C9orf3 |
| Gene Alias: | AOPEP |
| Gene Description: | chromosome 9 open reading frame 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |