TSS: Hg 101548.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|FAC= | |||
|FACC= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |||
|distance_to_tss=48390 | |distance_to_tss=48390 | ||
|end=95268875 | |||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_000136 | |nearest_refseq=NM_000136 | ||
|nearest_unigene=Hs.494529 | |nearest_unigene=Hs.494529 | ||
|num_trans=0 | |||
|species=human | |||
|start=95268853 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101548.1 | |tss_id=hg_101548.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:48, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 48390 |
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| Nearest PromoterID: | NM_001243743 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | FANCC |
| Gene Alias: | FA3 |
| Gene Description: | Fanconi anemia complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |