TSS: Hg 101615.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CTSL2= | |||
|CTSU= | |||
|all_trans=ENST00000479932.1:0 uc064upm.1:0 AB001928:0 AK310740:0 AK310645:0 Y14734:7 BC023504:9 BC110512:-29 AF070448:49 ENST00000259470.5:-160 NM_001333:-160 uc004awt.4:-160 AY358641:-160 ENST00000538255.5:-493 NM_001201575:-493 uc010msi.4:-493 AK312806:-493 | |||
|chr=chr9 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |||
|distance_to_tss=169 | |distance_to_tss=169 | ||
|end=97039150 | |||
|entrez_id=1515 | |entrez_id=1515 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=CATL2|CTSL2|CTSU | |gene_alias=CATL2|CTSL2|CTSU | ||
|gene_description=cathepsin V | |gene_description=cathepsin V | ||
|gene_name=CTSV | |gene_id=1515 | ||
|gene_name=cathepsin V | |||
|gene_source=HGNC:2538 | |||
|gene_symbol=CTSV | |||
|gene_synonyms=CTSU | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:2538 | |||
|nearest_ensembl=ENSG00000136943 | |nearest_ensembl=ENSG00000136943 | ||
|nearest_promoter_id=NM_001333 | |nearest_promoter_id=NM_001333 | ||
|nearest_refseq=NM_001333 | |nearest_refseq=NM_001333 | ||
|nearest_unigene=Hs.610096 | |nearest_unigene=Hs.610096 | ||
|num_trans=17 | |||
|species=human | |||
|start=97039132 | |||
|strand=- | |||
|transcript_name=ENST00000479932.1 uc064upm.1 AB001928 AK310740 AK310645 | |||
|tss_classification=yes | |||
|tss_id=hg_101615.1 | |tss_id=hg_101615.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:51, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 169 |
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| Nearest PromoterID: | NM_001333 |
| Entrez ID: | 1515 |
| Nearest Unigene: | Hs.610096 |
| Nearest Refseq: | NM_001333 |
| Nearest Ensembl: | ENSG00000136943 |
| Gene Name: | cathepsin V |
| Gene Alias: | CATL2 |
| Gene Description: | cathepsin V |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.