TSS: Hg 101705.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=35 |entrez_id=85365 |gc_percent=0.696517 |gene_alias=CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 |gene_description="ALG2, alpha-1,3/1...") |
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{{TSSDetail | {{TSSDetail | ||
|CDGIi= | |||
|CMS14= | |||
|CMSTA3= | |||
|NET38= | |||
|all_trans=ENST00000238477.5:0 uc064utt.1:0 AK074988:0 AB161356:0 AK075172:0 BC017876:0 AK027417:0 AK074704:0 DQ570480:0 ENST00000476832.1:-1 uc004azf.4:-1 KJ895084:5 DQ891989:7 DQ895179:7 CU676096:8 NM_033087:-9 NR_024532:-9 | |||
|chr=chr9 | |||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |||
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=99221955 | |||
|entrez_id=85365 | |entrez_id=85365 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 | |gene_alias=CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 | ||
|gene_description="ALG2, alpha-1,3/1,6-mannosyltransferase" | |gene_description="ALG2, alpha-1,3/1,6-mannosyltransferase" | ||
|gene_name=ALG2 | |gene_id=85365 | ||
|gene_name="ALG2, alpha-1,3/1,6-mannosyltransferase" | |||
|gene_source=HGNC:23159 | |||
|gene_symbol=ALG2 | |||
|gene_synonyms=CDGIi FLJ14511 NET38 hALPG2 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hALPG2= | |||
|hgnc_mgi_id=HGNC:23159 | |||
|nearest_ensembl=ENSG00000119523 | |nearest_ensembl=ENSG00000119523 | ||
|nearest_promoter_id=NM_033087 | |nearest_promoter_id=NM_033087 | ||
|nearest_refseq=NM_033087 | |nearest_refseq=NM_033087 | ||
|nearest_unigene=Hs.40919 | |nearest_unigene=Hs.40919 | ||
|num_trans=17 | |||
|species=human | |||
|start=99221902 | |||
|strand=- | |||
|transcript_name=ENST00000238477.5 uc064utt.1 AK074988 AB161356 AK075172 BC017876 AK027417 AK074704 DQ570480 | |||
|tss_classification=yes | |||
|tss_id=hg_101705.1 | |tss_id=hg_101705.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A0A0MTE0 | |||
}} | }} | ||
Revision as of 18:55, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 35 |
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| Nearest PromoterID: | NM_033087 |
| Entrez ID: | 85365 |
| Nearest Unigene: | Hs.40919 |
| Nearest Refseq: | NM_033087 |
| Nearest Ensembl: | ENSG00000119523 |
| Gene Name: | "ALG2, alpha-1,3/1,6-mannosyltransferase" |
| Gene Alias: | CDG1I |
| Gene Description: | "ALG2, alpha-1,3/1,6-mannosyltransferase" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.