TSS: Hg 101708.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=6865 |entrez_id=100996569 |gc_percent=0.437811 |gene_alias=- |gene_description="non-protein coding RNA, associated with MAP kin...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=DQ673961:-447 DQ673975:-460 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-447 | |||
|distance_to_tss=6865 | |distance_to_tss=6865 | ||
|end=99368407 | |||
|entrez_id=100996569 | |entrez_id=100996569 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NR_102270 | |nearest_refseq=NR_102270 | ||
|nearest_unigene=Hs.745280 | |nearest_unigene=Hs.745280 | ||
|num_trans=2 | |||
|species=human | |||
|start=99368377 | |||
|strand=- | |||
|transcript_name=DQ673961 | |||
|tss_classification=no | |||
|tss_id=hg_101708.1 | |tss_id=hg_101708.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:55, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 6865 |
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Nearest PromoterID: | NR_102270 |
Entrez ID: | 100996569 |
Nearest Unigene: | Hs.745280 |
Nearest Refseq: | NR_102270 |
Nearest Ensembl: | ENSG00000271086 |
Gene Name: | NAMA |
Gene Alias: | - |
Gene Description: | "non-protein coding RNA, associated with MAP kinase pathway and growth arrest" |
Gene Type: | ncRNA |
CpG%: | 0.015 |
GC%: | 0.437811 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |