TSS: Hg 10172.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=-179 |entrez_id=100505975 |gc_percent=0.656716 |gene_alias=- |gene_description=ENO1 antisense RNA 1 |gene_name=ENO1-AS1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC019084:-2 M14328:-3 BC011130:-4 AK098420:6 BC015641:-8 GQ472226:-8 BC027725:-10 ENST00000492343.1:-15 uc057bzu.1:-15 BC004458:-17 BC009912:-17 BC001810:18 BC022545:-25 AK222517:-25 D28437:-25 AK090592:-26 ENST00000486051.5:-27 uc057bzt.1:-27 AK223192:-28 ENST00000234590.8:-29 uc001apj.3:-29 BX537400:-29 AK309291:-31 AK315417:-51 ENST00000497492.1:384 uc057bzs.1:384 NM_001428:-431 AK309177:-431 | |||
|chr=chr1 | |||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-2 | |||
|distance_to_tss=-179 | |distance_to_tss=-179 | ||
|end=8878661 | |||
|entrez_id=100505975 | |entrez_id=100505975 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_038351 | |nearest_refseq=NR_038351 | ||
|nearest_unigene=Hs.429843 | |nearest_unigene=Hs.429843 | ||
|num_trans=28 | |||
|species=human | |||
|start=8878650 | |||
|strand=- | |||
|transcript_name=BC019084 | |||
|tss_classification=yes | |||
|tss_id=hg_10172.1 | |tss_id=hg_10172.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:55, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -179 |
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| Nearest PromoterID: | NR_038351 |
| Entrez ID: | 100505975 |
| Nearest Unigene: | Hs.429843 |
| Nearest Refseq: | NR_038351 |
| Nearest Ensembl: | ENSG00000230679 |
| Gene Name: | ENO1-AS1 |
| Gene Alias: | - |
| Gene Description: | ENO1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.09 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |