TSS: Hg 101749.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=10789 |entrez_id=229 |gc_percent=0.517413 |gene_alias=ALDB|ALDO2 |gene_description="aldolase, fructose-bisphosphate B" |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
|ALDO2= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=10789 | |distance_to_tss=10789 | ||
|end=101425015 | |||
|entrez_id=229 | |entrez_id=229 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_000035 | |nearest_refseq=NM_000035 | ||
|nearest_unigene=Hs.530274 | |nearest_unigene=Hs.530274 | ||
|num_trans=0 | |||
|species=human | |||
|start=101424966 | |||
|strand=- | |||
|tata_box="-100(GGGTATATAAGG,-,0.00)" | |tata_box="-100(GGGTATATAAGG,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101749.1 | |tss_id=hg_101749.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:56, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 10789 |
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Nearest PromoterID: | NM_000035 |
Entrez ID: | 229 |
Nearest Unigene: | Hs.530274 |
Nearest Refseq: | NM_000035 |
Nearest Ensembl: | ENSG00000136872 |
Gene Name: | ALDOB |
Gene Alias: | ALDB |
Gene Description: | "aldolase, fructose-bisphosphate B" |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.517413 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(GGGTATATAAGG,-,0.00)" |