TSS: Hg 101767.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-186 |entrez_id=5535 |gc_percent=0.58209 |gene_alias=PPP3RL |gene_description="protein phosphatase 3 regulatory subunit B, beta...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK310471:160 ENST00000374806.1:180 NM_147180:180 uc004bbr.3:180 BC030595:180 AF400667:212 AK057524:221 AK302547:221 BC066299:242 JF432717:251 KJ891875:251 AF085237:260 AF145026:260 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=160 | |||
|distance_to_tss=-186 | |distance_to_tss=-186 | ||
|end=101595193 | |||
|entrez_id=5535 | |entrez_id=5535 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_147180 | |nearest_refseq=NM_147180 | ||
|nearest_unigene=Hs.151167 | |nearest_unigene=Hs.151167 | ||
|num_trans=13 | |||
|species=human | |||
|start=101595180 | |||
|strand=- | |||
|transcript_name=AK310471 | |||
|tss_classification=yes | |||
|tss_id=hg_101767.1 | |tss_id=hg_101767.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:57, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -186 |
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| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | PPP3R2 |
| Gene Alias: | PPP3RL |
| Gene Description: | "protein phosphatase 3 regulatory subunit B, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |