TSS: Hg 101830.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=176 |entrez_id=2218 |gc_percent=0.661692 |gene_alias=CMD1X|FCMD|LGMD2M|MDDGA4|MDDGB4|MDDGC4 |gene_description=fukutin |gene_name...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FCMD= | |||
|LGMD2M= | |||
|MDDGA4= | |||
|MDDGB4= | |||
|MDDGC4= | |||
|all_trans=ENST00000421614.1:272 uc064uxb.1:272 | |||
|chr=chr9 | |||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=272 | |||
|distance_to_tss=176 | |distance_to_tss=176 | ||
|end=105558311 | |||
|entrez_id=2218 | |entrez_id=2218 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_006731 | |nearest_refseq=NM_006731 | ||
|nearest_unigene=Hs.55777 | |nearest_unigene=Hs.55777 | ||
|num_trans=2 | |||
|species=human | |||
|start=105558300 | |||
|strand=- | |||
|transcript_name=ENST00000421614.1 uc064uxb.1 | |||
|tss_classification=yes | |||
|tss_id=hg_101830.1 | |tss_id=hg_101830.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:00, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 176 |
|---|---|
| Nearest PromoterID: | NM_001198963 |
| Entrez ID: | 2218 |
| Nearest Unigene: | Hs.55777 |
| Nearest Refseq: | NM_006731 |
| Nearest Ensembl: | ENSG00000106692 |
| Gene Name: | FKTN |
| Gene Alias: | CMD1X |
| Gene Description: | fukutin |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |