TSS: Hg 101866.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=399 |entrez_id=8518 |gc_percent=0.681592 |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 |gene_description="inhibitor of kappa light pol...") |
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{{TSSDetail | {{TSSDetail | ||
|ELP1= | |||
|FD= | |||
|IKAP= | |||
|IKI3= | |||
|TOT1= | |||
|all_trans=ENST00000537196.1:-15 uc010mtq.4:-15 CR749385:-15 BC033094:34 AK304742:-36 AK225798:-149 AB210033:-156 AF044195:-172 ENST00000374647.9:-178 uc004bdm.5:-178 AK001641:-178 AF153419:-180 AK289962:-186 NM_003640:-394 NM_001318360:-394 | |||
|chr=chr9 | |||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-15 | |||
|distance_to_tss=399 | |distance_to_tss=399 | ||
|end=108933938 | |||
|entrez_id=8518 | |entrez_id=8518 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | ||
|gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | |gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | ||
|gene_name=IKBKAP | |gene_id=8518 | ||
|gene_name="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | |||
|gene_source=HGNC:5959 | |||
|gene_symbol=IKBKAP | |||
|gene_synonyms=ELP1 IKAP IKI3 TOT1 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5959 | |||
|nearest_ensembl=ENSG00000070061 | |nearest_ensembl=ENSG00000070061 | ||
|nearest_promoter_id=NM_003640 | |nearest_promoter_id=NM_003640 | ||
|nearest_refseq=NM_003640 | |nearest_refseq=NM_003640 | ||
|nearest_unigene=Hs.494738 | |nearest_unigene=Hs.494738 | ||
|num_trans=15 | |||
|species=human | |||
|start=108933927 | |||
|strand=- | |||
|transcript_name=ENST00000537196.1 uc010mtq.4 CR749385 | |||
|tss_classification=yes | |||
|tss_id=hg_101866.1 | |tss_id=hg_101866.1 | ||
|tss_score=1 | |||
|uniprot_id=F5H2T0 Q68DI5 | |||
}} | }} | ||
Revision as of 19:02, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 399 |
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| Nearest PromoterID: | NM_003640 |
| Entrez ID: | 8518 |
| Nearest Unigene: | Hs.494738 |
| Nearest Refseq: | NM_003640 |
| Nearest Ensembl: | ENSG00000070061 |
| Gene Name: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Alias: | DYS |
| Gene Description: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.