TSS: Hg 101921.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=5055 |entrez_id=7295 |gc_percent=0.288557 |gene_alias=TRDX|TRX|TRX1 |gene_description=thioredoxin |gene_name=TXN |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
|TRX= | |||
|TRX1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=5055 | |distance_to_tss=5055 | ||
|end=110251587 | |||
|entrez_id=7295 | |entrez_id=7295 | ||
|gc_percent=0.288557 | |gc_percent=0.288557 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_003329 | |nearest_refseq=NM_003329 | ||
|nearest_unigene=Hs.435136 | |nearest_unigene=Hs.435136 | ||
|num_trans=0 | |||
|species=human | |||
|start=110251583 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101921.1 | |tss_id=hg_101921.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:04, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 5055 |
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| Nearest PromoterID: | NM_003329 |
| Entrez ID: | 7295 |
| Nearest Unigene: | Hs.435136 |
| Nearest Refseq: | NM_003329 |
| Nearest Ensembl: | ENSG00000136810 |
| Gene Name: | TXN |
| Gene Alias: | TRDX |
| Gene Description: | thioredoxin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.288557 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |