TSS: Hg 101931.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=755 |entrez_id=79987 |gc_percent=0.666667 |gene_alias=C9orf13|CCP22|POLYDOM|SEL-OB|SELOB |gene_description="sushi, von Willebran...") |
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{{TSSDetail | {{TSSDetail | ||
|CCP22= | |||
|POLYDOM= | |||
|SEL-OB= | |||
|SELOB= | |||
|chr=chr9 | |||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance= | |||
|distance_to_tss=755 | |distance_to_tss=755 | ||
|end=110579135 | |||
|entrez_id=79987 | |entrez_id=79987 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_153366 | |nearest_refseq=NM_153366 | ||
|nearest_unigene=Hs.522334 | |nearest_unigene=Hs.522334 | ||
|num_trans=0 | |||
|species=human | |||
|start=110579115 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101931.1 | |tss_id=hg_101931.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:04, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 755 |
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| Nearest PromoterID: | NM_153366 |
| Entrez ID: | 79987 |
| Nearest Unigene: | Hs.522334 |
| Nearest Refseq: | NM_153366 |
| Nearest Ensembl: | ENSG00000165124 |
| Gene Name: | SVEP1 |
| Gene Alias: | C9orf13 |
| Gene Description: | "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |