TSS: Hg 102007.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=923 |entrez_id=23392 |gc_percent=0.741294 |gene_alias=ECM29 |gene_description=KIAA0368 |gene_name=KIAA0368 |gene_type=protein-co...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000602447.5:134 uc064vax.1:134 AK122712:-196 ENST00000602978.1:-226 uc064vay.1:-226 AK308313:251 | |||
|chr=chr9 | |||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=134 | |||
|distance_to_tss=923 | |distance_to_tss=923 | ||
|end=111483831 | |||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=ECM29 | |gene_alias=ECM29 | ||
|gene_description=KIAA0368 | |gene_description=KIAA0368 | ||
|gene_id=23392 | |||
|gene_name=KIAA0368 | |gene_name=KIAA0368 | ||
|gene_source=HGNC:29020 | |||
|gene_symbol=KIAA0368 | |||
|gene_synonyms=ECM29 FLJ22036 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29020 | |||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
|nearest_promoter_id=NM_001080398 | |nearest_promoter_id=NM_001080398 | ||
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
|num_trans=6 | |||
|species=human | |||
|start=111483812 | |||
|strand=- | |||
|transcript_name=ENST00000602447.5 uc064vax.1 | |||
|tss_classification=no | |||
|tss_id=hg_102007.1 | |tss_id=hg_102007.1 | ||
|tss_score=1 | |||
|uniprot_id=R4GMY1 | |||
}} | }} | ||
Revision as of 19:08, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 923 |
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| Nearest PromoterID: | NM_001080398 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | KIAA0368 |
| Gene Alias: | ECM29 |
| Gene Description: | KIAA0368 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.