TSS: Hg 102064.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=12748 |entrez_id=9991 |gc_percent=0.353234 |gene_alias=ROD1 |gene_description=polypyrimidine tract binding protein 3 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=12748 | |distance_to_tss=12748 | ||
|end=112320280 | |||
|entrez_id=9991 | |entrez_id=9991 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_005156 | |nearest_refseq=NM_005156 | ||
|nearest_unigene=Hs.269988 | |nearest_unigene=Hs.269988 | ||
|num_trans=0 | |||
|species=human | |||
|start=112320275 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102064.1 | |tss_id=hg_102064.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:10, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 12748 |
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| Nearest PromoterID: | NM_001244898 |
| Entrez ID: | 9991 |
| Nearest Unigene: | Hs.269988 |
| Nearest Refseq: | NM_005156 |
| Nearest Ensembl: | ENSG00000119314 |
| Gene Name: | PTBP3 |
| Gene Alias: | ROD1 |
| Gene Description: | polypyrimidine tract binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |