TSS: Hg 102070.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-135 |entrez_id=84263 |gc_percent=0.651741 |gene_alias=C9orf99|SDR13C1 |gene_description=hydroxysteroid dehydrogenase like 2 |g...") |
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{{TSSDetail | {{TSSDetail | ||
|SDR13C1= | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance= | |||
|distance_to_tss=-135 | |distance_to_tss=-135 | ||
|end=112379781 | |||
|entrez_id=84263 | |entrez_id=84263 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_032303 | |nearest_refseq=NM_032303 | ||
|nearest_unigene=Hs.59486 | |nearest_unigene=Hs.59486 | ||
|num_trans=0 | |||
|species=human | |||
|start=112379766 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102070.1 | |tss_id=hg_102070.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:10, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -135 |
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| Nearest PromoterID: | NM_001195822 |
| Entrez ID: | 84263 |
| Nearest Unigene: | Hs.59486 |
| Nearest Refseq: | NM_032303 |
| Nearest Ensembl: | ENSG00000119471 |
| Gene Name: | HSDL2 |
| Gene Alias: | C9orf99 |
| Gene Description: | hydroxysteroid dehydrogenase like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |