TSS: Hg 10218.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-20401 |entrez_id=106614088 |gc_percent=0.616915 |gene_alias=- |gene_description=MIR34A host gene |gene_name=MIR34AHG |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=uc057cao.1:118 | |||
|chr=chr1 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=118 | |||
|distance_to_tss=-20401 | |distance_to_tss=-20401 | ||
|end=9202741 | |||
|entrez_id=106614088 | |entrez_id=106614088 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_132742 | |nearest_refseq=NR_132742 | ||
|nearest_unigene=Hs.551837 | |nearest_unigene=Hs.551837 | ||
|num_trans=1 | |||
|species=human | |||
|start=9202736 | |||
|strand=- | |||
|transcript_name=uc057cao.1 | |||
|tss_classification=yes | |||
|tss_id=hg_10218.1 | |tss_id=hg_10218.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:15, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -20401 |
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| Nearest PromoterID: | NR_132742 |
| Entrez ID: | 106614088 |
| Nearest Unigene: | Hs.551837 |
| Nearest Refseq: | NR_132742 |
| Nearest Ensembl: | ENSG00000228526 |
| Gene Name: | MIR34AHG |
| Gene Alias: | - |
| Gene Description: | MIR34A host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |