TSS: Hg 10224.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=767 |entrez_id=5293 |gc_percent=0.641791 |gene_alias=APDS|IMD14|P110DELTA|PI3K|p110D |gene_description="phosphatidylinositol-4,5...") |
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{{TSSDetail | {{TSSDetail | ||
|IMD14= | |||
|P110DELTA= | |||
|PI3K= | |||
|chr=chr1 | |||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance= | |||
|distance_to_tss=767 | |distance_to_tss=767 | ||
|end=9652518 | |||
|entrez_id=5293 | |entrez_id=5293 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_005026 | |nearest_refseq=NM_005026 | ||
|nearest_unigene=Hs.518451 | |nearest_unigene=Hs.518451 | ||
|num_trans=0 | |||
|p110D= | |||
|species=human | |||
|start=9652480 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10224.1 | |tss_id=hg_10224.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:17, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 767 |
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| Nearest PromoterID: | NM_005026 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | PIK3CD |
| Gene Alias: | APDS |
| Gene Description: | "phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta" |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |