TSS: Hg 102316.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-1130 |entrez_id=26147 |gc_percent=0.58209 |gene_alias=MTF2L1|PCL3|TDRD19B |gene_description=PHD finger protein 19 |gene_name=P...") |
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{{TSSDetail | {{TSSDetail | ||
|PCL3= | |||
|TDRD19B= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=-1130 | |distance_to_tss=-1130 | ||
|end=120878466 | |||
|entrez_id=26147 | |entrez_id=26147 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_015651 | |nearest_refseq=NM_015651 | ||
|nearest_unigene=Hs.460124 | |nearest_unigene=Hs.460124 | ||
|num_trans=0 | |||
|species=human | |||
|start=120878450 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102316.1 | |tss_id=hg_102316.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:21, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1130 |
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| Nearest PromoterID: | NM_015651 |
| Entrez ID: | 26147 |
| Nearest Unigene: | Hs.460124 |
| Nearest Refseq: | NM_015651 |
| Nearest Ensembl: | ENSG00000119403 |
| Gene Name: | PHF19 |
| Gene Alias: | MTF2L1 |
| Gene Description: | PHD finger protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |