TSS: Hg 102344.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=963 |entrez_id=2934 |gc_percent=0.562189 |gene_alias=ADF|AGEL |gene_description=gelsolin |gene_name=GSN |gene_type=protein-codin...") |
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{{TSSDetail | {{TSSDetail | ||
|AGEL= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |||
|distance_to_tss=963 | |distance_to_tss=963 | ||
|end=121269072 | |||
|entrez_id=2934 | |entrez_id=2934 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
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|nearest_refseq=NM_000177 | |nearest_refseq=NM_000177 | ||
|nearest_unigene=Hs.522373 | |nearest_unigene=Hs.522373 | ||
|num_trans=0 | |||
|species=human | |||
|start=121269057 | |||
|strand=- | |||
|tata_box="-34(GTGTTTTAAAGC,-,0.00)" | |tata_box="-34(GTGTTTTAAAGC,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102344.1 | |tss_id=hg_102344.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 19:22, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 963 |
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Nearest PromoterID: | NM_001127662 |
Entrez ID: | 2934 |
Nearest Unigene: | Hs.522373 |
Nearest Refseq: | NM_000177 |
Nearest Ensembl: | ENSG00000148180 |
Gene Name: | GSN |
Gene Alias: | ADF |
Gene Description: | gelsolin |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.562189 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GTGTTTTAAAGC,-,0.00)" |