TSS: Hg 102376.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=129833 |entrez_id=158135 |gc_percent=0.378109 |gene_alias=C9orf20|bA244O19.1 |gene_description=tubulin tyrosine ligase like 11 |...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000411790.1:25 uc004bls.1:25 BC039180:25 | |||
|bA244O19.1= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=25 | |||
|distance_to_tss=129833 | |distance_to_tss=129833 | ||
|end=121963803 | |||
|entrez_id=158135 | |entrez_id=158135 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=C9orf20|bA244O19.1 | |gene_alias=C9orf20|bA244O19.1 | ||
|gene_description=tubulin tyrosine ligase like 11 | |gene_description=tubulin tyrosine ligase like 11 | ||
|gene_name=TTLL11 | |gene_id=105376261 | ||
|gene_name=TTLL11 intronic transcript 1 | |||
|gene_source=HGNC:24214 | |||
|gene_symbol=TTLL11-IT1 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:24214 | |||
|nearest_ensembl=ENSG00000175764 | |nearest_ensembl=ENSG00000175764 | ||
|nearest_promoter_id=NM_001139442 | |nearest_promoter_id=NM_001139442 | ||
|nearest_refseq=NM_194252 | |nearest_refseq=NM_194252 | ||
|nearest_unigene=Hs.438937 | |nearest_unigene=Hs.438937 | ||
|num_trans=3 | |||
|species=human | |||
|start=121963743 | |||
|strand=- | |||
|transcript_name=ENST00000411790.1 uc004bls.1 BC039180 | |||
|tss_classification=yes | |||
|tss_id=hg_102376.1 | |tss_id=hg_102376.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 19:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 129833 |
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| Nearest PromoterID: | NM_001139442 |
| Entrez ID: | 158135 |
| Nearest Unigene: | Hs.438937 |
| Nearest Refseq: | NM_194252 |
| Nearest Ensembl: | ENSG00000175764 |
| Gene Name: | TTLL11 intronic transcript 1 |
| Gene Alias: | C9orf20 |
| Gene Description: | tubulin tyrosine ligase like 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.