TSS: Hg 10243.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=12796 |entrez_id=22883 |gc_percent=0.298507 |gene_alias=ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 |gene_des...") |
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{{TSSDetail | {{TSSDetail | ||
|CDHR12= | |||
|CST-1= | |||
|CSTN1= | |||
|PIK3CD= | |||
|XB31alpha= | |||
|alcalpha1= | |||
|alcalpha2= | |||
|chr=chr1 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=12796 | |distance_to_tss=12796 | ||
|end=9811732 | |||
|entrez_id=22883 | |entrez_id=22883 | ||
|gc_percent=0.298507 | |gc_percent=0.298507 | ||
| Line 12: | Line 22: | ||
|nearest_refseq=NM_014944 | |nearest_refseq=NM_014944 | ||
|nearest_unigene=Hs.29665 | |nearest_unigene=Hs.29665 | ||
|num_trans=0 | |||
|species=human | |||
|start=9811728 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10243.1 | |tss_id=hg_10243.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:26, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 12796 |
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| Nearest PromoterID: | NM_001009566 |
| Entrez ID: | 22883 |
| Nearest Unigene: | Hs.29665 |
| Nearest Refseq: | NM_014944 |
| Nearest Ensembl: | ENSG00000171603 |
| Gene Name: | CLSTN1 |
| Gene Alias: | ALC-ALPHA |
| Gene Description: | calsyntenin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.298507 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |