TSS: Hg 102526.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-82473 |entrez_id=23099 |gc_percent=0.716418 |gene_alias=ZBTB22B|ZNF-X|ZNF297B |gene_description=zinc finger and BTB domain cont...") |
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{{TSSDetail | {{TSSDetail | ||
|ZNF-X= | |||
|ZNF297B= | |||
|chr=chr9 | |||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance= | |||
|distance_to_tss=-82473 | |distance_to_tss=-82473 | ||
|end=126722536 | |||
|entrez_id=23099 | |entrez_id=23099 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_014007 | |nearest_refseq=NM_014007 | ||
|nearest_unigene=Hs.355581 | |nearest_unigene=Hs.355581 | ||
|num_trans=0 | |||
|species=human | |||
|start=126722529 | |||
|strand=- | |||
|tata_box="-95(CCCTTTCTGGGC,+,0.00)" | |tata_box="-95(CCCTTTCTGGGC,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102526.1 | |tss_id=hg_102526.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:30, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -82473 |
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| Nearest PromoterID: | NM_014007 |
| Entrez ID: | 23099 |
| Nearest Unigene: | Hs.355581 |
| Nearest Refseq: | NM_014007 |
| Nearest Ensembl: | ENSG00000169155 |
| Gene Name: | ZBTB43 |
| Gene Alias: | ZBTB22B |
| Gene Description: | zinc finger and BTB domain containing 43 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-95(CCCTTTCTGGGC,+,0.00)" |