TSS: Hg 102541.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=53164 |entrez_id=90678 |gc_percent=0.492537 |gene_alias=CMT2P|RIFLE|TAL |gene_description=leucine rich repeat and sterile alpha...") |
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{{TSSDetail | {{TSSDetail | ||
|RIFLE= | |||
|TAL= | |||
|all_trans=BC023210:-170 | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-170 | |||
|distance_to_tss=53164 | |distance_to_tss=53164 | ||
|end=127505434 | |||
|entrez_id=90678 | |entrez_id=90678 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=CMT2P|RIFLE|TAL | |gene_alias=CMT2P|RIFLE|TAL | ||
|gene_description=leucine rich repeat and sterile alpha motif containing 1 | |gene_description=leucine rich repeat and sterile alpha motif containing 1 | ||
|gene_name= | |gene_id=64855 | ||
|gene_name=family with sequence similarity 129 member B | |||
|gene_source=HGNC:25282 | |||
|gene_symbol=FAM129B | |||
|gene_synonyms=DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25282 | |||
|nearest_ensembl=ENSG00000148356 | |nearest_ensembl=ENSG00000148356 | ||
|nearest_promoter_id=NM_001005374 | |nearest_promoter_id=NM_001005374 | ||
|nearest_refseq=NM_138361 | |nearest_refseq=NM_138361 | ||
|nearest_unigene=Hs.495188 | |nearest_unigene=Hs.495188 | ||
|num_trans=1 | |||
|species=human | |||
|start=127505404 | |||
|strand=- | |||
|transcript_name=BC023210 | |||
|tss_classification=yes | |||
|tss_id=hg_102541.1 | |tss_id=hg_102541.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 19:30, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 53164 |
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| Nearest PromoterID: | NM_001005374 |
| Entrez ID: | 90678 |
| Nearest Unigene: | Hs.495188 |
| Nearest Refseq: | NM_138361 |
| Nearest Ensembl: | ENSG00000148356 |
| Gene Name: | family with sequence similarity 129 member B |
| Gene Alias: | CMT2P |
| Gene Description: | leucine rich repeat and sterile alpha motif containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.