TSS: Hg 102592.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=13487 |entrez_id=2022 |gc_percent=0.393035 |gene_alias=END|HHT1|ORW1 |gene_description=endoglin |gene_name=ENG |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
|HHT1= | |||
|ORW1= | |||
|all_trans=ENST00000626142.1:-355 uc064vyi.1:-355 | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-355 | |||
|distance_to_tss=13487 | |distance_to_tss=13487 | ||
|end=127833687 | |||
|entrez_id=2022 | |entrez_id=2022 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_000118 | |nearest_refseq=NM_000118 | ||
|nearest_unigene=Hs.76753 | |nearest_unigene=Hs.76753 | ||
|num_trans=2 | |||
|species=human | |||
|start=127833672 | |||
|strand=- | |||
|tata_box="21(TCTTTTAGACTG,+,0.00)" | |tata_box="21(TCTTTTAGACTG,+,0.00)" | ||
|transcript_name=ENST00000626142.1 uc064vyi.1 | |||
|tss_classification=no | |||
|tss_id=hg_102592.1 | |tss_id=hg_102592.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:33, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 13487 |
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| Nearest PromoterID: | NM_001278138 |
| Entrez ID: | 2022 |
| Nearest Unigene: | Hs.76753 |
| Nearest Refseq: | NM_000118 |
| Nearest Ensembl: | ENSG00000106991 |
| Gene Name: | ENG |
| Gene Alias: | END |
| Gene Description: | endoglin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "21(TCTTTTAGACTG,+,0.00)" |