TSS: Hg 102618.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-1237 |entrez_id=30815 |gc_percent=0.552239 |gene_alias=SIAT7-F|SIAT7F|ST6GALNACVI |gene_description="ST6 N-acetylgalactosamini...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SIAT7F= | |||
|ST6GALNACVI= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=-1237 | |distance_to_tss=-1237 | ||
|end=127906598 | |||
|entrez_id=30815 | |entrez_id=30815 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_013443 | |nearest_refseq=NM_013443 | ||
|nearest_unigene=Hs.109672 | |nearest_unigene=Hs.109672 | ||
|num_trans=0 | |||
|species=human | |||
|start=127906572 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102618.1 | |tss_id=hg_102618.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:34, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -1237 |
|---|---|
| Nearest PromoterID: | NM_001287002 |
| Entrez ID: | 30815 |
| Nearest Unigene: | Hs.109672 |
| Nearest Refseq: | NM_013443 |
| Nearest Ensembl: | ENSG00000160408 |
| Gene Name: | ST6GALNAC6 |
| Gene Alias: | SIAT7-F |
| Gene Description: | "ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |