TSS: Hg 102627.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=3073 |entrez_id=8818 |gc_percent=0.557214 |gene_alias=CDG1U |gene_description="dolichyl-phosphate mannosyltransferase subunit 2...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=3073 | |distance_to_tss=3073 | ||
|end=127935429 | |||
|entrez_id=8818 | |entrez_id=8818 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_003863 | |nearest_refseq=NM_003863 | ||
|nearest_unigene=Hs.108973 | |nearest_unigene=Hs.108973 | ||
|num_trans=0 | |||
|species=human | |||
|start=127935393 | |||
|strand=- | |||
|tata_box="-72(GGGCCTAAAAGA,-,0.00)" | |tata_box="-72(GGGCCTAAAAGA,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102627.1 | |tss_id=hg_102627.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:34, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3073 |
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| Nearest PromoterID: | NM_003863 |
| Entrez ID: | 8818 |
| Nearest Unigene: | Hs.108973 |
| Nearest Refseq: | NM_003863 |
| Nearest Ensembl: | ENSG00000136908 |
| Gene Name: | DPM2 |
| Gene Alias: | CDG1U |
| Gene Description: | "dolichyl-phosphate mannosyltransferase subunit 2, regulatory" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-72(GGGCCTAAAAGA,-,0.00)" |